Genomes
Currently, there are several mango genome sequences available. Sequence and annotation data are available in the Downloads section.
- cv. Irwin, by Wijesundara et al. 2024
- cv. Tommy Atkins, by the Mango Genome Consortium 2021
- cv. Alphonso, by Wang et al. 2020 Available at the NCBI.
- cv. Irwin, by Ma et al. 2021 Only raw data available at the NGDC CNCB.
- cv. Hong Xiang Ya, by Li et al. 2020 Available at the NGDC CNCB Genome Warehouse.
Another genomes were also sequenced but they are not published yet. Their genome assembly information can be found at the NCBI:
Genome stats
| Irwin 2024 | Tommy Atkins | Alphonso | Irwin 2021 | Hong Xiang Ya | |
|---|---|---|---|---|---|
| Number of sequences | 23 | 571 | 250 | 1305 | 120 |
| Assembly size (Mb) | 365 | 377.29 | 391.96 | 396.19 | 371.62 |
| Longest sequence (Mb) | 28.79 | 22.40 | 29.46 | 13.15 | 11.47 |
| Average length (Mb) | 15.85 | 0.66 | 1.56 | 0.30 | 3.10 |
| Contig N50 length (Mb) | 14.98 | 0.04 | 3.50 | 1.03 | 4.82 |
